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    Software Engineer II - Seattle, United States - Allen Institute for Cell Science

    Allen Institute for Cell Science
    Allen Institute for Cell Science Seattle, United States

    3 weeks ago

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    Description

    The mission of the Allen Institute is to unlock the complexities of bioscience and advance our knowledge to improve human health. Using an open science, multi-scale, team-oriented approach, the Allen Institute focuses on accelerating foundational research, developing standards and models, and cultivating new ideas to make a broad, transformational impact on science.

    The Allen Institute for Neural Dynamics (AIND) is focused on foundational neuroscience. We are interested in how the brain builds our understanding of the complex world to guide the flexible behaviors that address our biological needs. The answers will be in terms of the algorithms implemented by circuits interacting across the whole brain and body. We develop experimental and theoretical methods and employ a team-based approach for discovery neuroscience. Knowledge, data, models, and tools will be widely shared, in part to support the development of therapies for brain disorders.

    We are seeking a skilled Software Engineer to work with interdisciplinary teams of experimental and computational scientists to facilitate the analysis of the rich datasets we are acquiring, both within our team and by the broader neuroscience community. This person will design and improve schemas for the data and metadata that are the critical foundation of our mission to support open, reproducible, and science. The candidate will work closely with internal and external scientific teams to visualize data and write and support software to facilitate the use of these tools. The ideal candidate will be excited to engage deeply with scientists, familiar with modern Python software development practices, and have experience analyzing complex biological data.

    The Allen Institute believes that team science significantly benefits from the participation of diverse voices, experiences, and backgrounds. Progress in science benefits from multiple perspectives. We are committed to increasing diversity across every team and encourage people from all backgrounds to apply for this role.

    Essential Functions

  • Develop and support interactive visualization tools to enable cross-team communication and analyses of physiological and anatomical data
  • Maintain data and metadata schemas, extending them to incorporate new experimental and analytical needs
  • Develop and support metadata tools to support users
  • Develop and support new dashboards to monitor the status of data projects to enable rapid feedback and iteration of experiments and analyses
  • Support cross-team communication about data management and analysis

    • Note: Reasonable accommodations may be made to enable individuals with disabilities to perform the essential functions. This description reflects management's assignment of essential functions; it does not proscribe or restrict the tasks that may be assigned.

    Required Education and Experience

  • Bachelor's degree in Neuroscience, Computational Neuroscience, or related field; or an equivalent combination of degree and experience
  • 1 year of equivalent experience in creating scientific software
  • Experience with scientific computing in Python

    • Preferred Education and Experience

  • PhD in Neuroscience, Computational Neuroscience, or related field
  • Experience analyzing neurophysiology and/or neuroanatomy data
  • Experience with version control software (e.g. Git) and continuous integration workflows
  • Experience with scientific visualization methods
  • Positive attitude, self-motivated, and ability to troubleshoot
  • Ability to work independently and within a collaborative, multi-disciplinary environment to meet aggressive timelines

    • Physical Demands

  • Fine motor movements in fingers/hands to operate computers and other office equipment; repetitive motion with lab equipment

    • Position Type/Expected Hours of Work

  • This role is currently working onsite and is expected to work onsite for the majority of working hours. The primary work location for this role is 615 Westlake Ave N, with flexibility to work remotely on a limited basis. We are a Washington State employer; any remote work must be performed in Washington State.

    • Travel

  • Attendance and participation in national and/or international conferences is required
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