Cloud & Linux System Engineer III - Louisville - Biodesix

    Biodesix
    Biodesix Louisville

    2 weeks ago

    Description
    ABOUT US
    Biodesix is a leading diagnostic solutions company, driven to improve clinical care and outcomes for patients. Biodesix Diagnostic Tests support clinical decisions to expedite personalized care and improve outcomes for patients with lung disease. Biodesix Development Services enable the world's leading biopharmaceutical, life sciences, and research institutions with scientific, technological, and operational capabilities that fuel the development of diagnostic tests, tools, and therapeutics.
    Our Mission: Transform patient care and improve outcomes through personalized diagnostics that are timely, accessible, and address immediate clinical needs.
    Our Vision: A world where patient diseases are conquered with the guidance of personalized diagnostics.
    For more information, please visit
    THE ROLE
    The Cloud & Linux System Engineer III serves as the primary owner responsible for engineering, securing, and continuously improving Biodesix's cloud platforms and Linux-based systems in support of regulated healthcare diagnostics. This role ensures stability, performance, and security of production environments while enabling the deployment of new applications, data services, and infrastructure capabilities that directly support our clinical and commercial operations. This role sets standards for cloud and Linux engineering practices and serves as a subject matter expert for regulated infrastructure environments. This position collaborates closely with security, software development, data engineering, and laboratory operations teams to maintain compliant, scalable, and highly available cloud environments.
    LOCATION
    On-Site in Louisville, CO
    WHAT YOU'LL DO
    Cloud Platform Administration (AWS)
    • Act as a subject matter expert for AWS workloads supporting CLIA/CAP/ISO-controlled laboratory systems.
    • Design, implement, and manage scalable, secure cloud environments using AWS services (EC2, S3, RDS, VPC, IAM, CloudWatch, etc.).
    • Optimize AWS infrastructure for performance, reliability, and cost efficiency.
    • Implement and maintain IAM roles, policies, VPC architecture, and network security controls.
    • Manage cloud-based backup, DR policies, and recovery procedures.
    • Maintain audit readiness for system configurations, access controls, and change records.
    Linux Systems Engineering
    • Install, configure, secure, and maintain Linux-based servers and associated services.
    • Perform system updates, patches, kernel updates, and vulnerability remediation.
    • Monitor performance, troubleshoot system issues, and tune resource utilization.
    • Support and manage services and architectures including Apache, MySQL/Postgres, Docker, and related components.
    • Automate recurring tasks using shell scripting and/or configuration management tools.
    Operational & Cross-Functional Responsibilities
    • Lead complex troubleshooting and root-cause investigations with cross-functional partners
    • Define and maintain infrastructure patterns, implementation standards, and automation frameworks
    • Identify system risks proactively and drives remediation plans to closure
    • Contribute to infrastructure roadmap direction and technology adoption strategy
    • Partner with development and DevOps teams to support CI/CD pipelines and deployment workflows.
    • Maintain structured documentation for configurations, procedures, standards, and infrastructure changes.
    • Participate in incident response, root cause analysis, and after-action reporting.
    • Provide Tier 3 support and escalate critical issues as required.
    • Support ticketing, ITIL-aligned change processes, and on-call rotation for production systems.
    • Contribute to departmental goals, continuous improvement, and IT modernization initiatives
    • Mentor junior and mid-level engineers, enabling skill development in cloud and Linux engineering practices.
    WHAT YOU'LL BRING
    • Associate's or Bachelor's degree in Information Systems, Computer Science, or related field; or equivalent combination of education and experience
    • 6-10+ years of IT experience supporting production cloud and Linux systems
    • Demonstrated AWS architecture and security engineering experience
    • Strong Linux system administration and shell scripting experience
    • Understanding of cloud and network security best practices
    • Experience with configuration/automation tools (Ansible, Puppet, Chef, etc.)
    • Familiarity with firewalls, routing, DNS, TLS, and identity access concepts
    • Containerization experience (Docker; Kubernetes a plus)
    • Azure or Azure Stack HCI exposure
    • CI/CD tooling familiarity
    • Database administration experience (MySQL, SQL, Postgres)
    • Must demonstrate strong skills in the following areas: analytical thinking, problem solving, communication, commitment to teamwork, and organization in a fast-paced, evolving environment
    WHAT YOU'LL GET
    • Annual Compensation range $160,000 to $165,000
    • Discretionary Bonus opportunity
    • Comprehensive health coverage: Medical, Dental, and Vision
    • Insurance: Short/Long Term Disability and Life Insurance
    • Financial benefits: 401(k), Flex Spending Account
    • 120 hours of annual vacation
    • 72 hours of paid sick time off
    • 11 paid holidays + 3 floating holidays
    • Employee Assistance Program
    • Voluntary Benefits
    • Employee recognition program
    Individual base compensation is based on various factors unique to each candidate, including skill set, experience, qualifications, and other job-related aspects.
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